rs225478 chr12:125981786 T>C
- Sequence
tgttttaggtaagctccctccccc[T/C]tgtgcaagttctcatcatgtatat
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- HLF_HUMAN CEBPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HLF_HUMAN | 2.34 | -2.87 | 1.50 | n/a | No Hit | |||
| CEBPA_HUMAN | 2.00 | -2.47 | 1.50 | -4.18 | Concordant |
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Motif analysis
