ADASTRA v1.6.10
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rs2259430
chr10:92387588
C
>
T
Sequence
ccaatcggaatcaatgggaaagca[C/T]gataaaagcactgactgcaaagtc
ASB in cell types
A549 (lung carcinoma)
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View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
A549 (lung carcinoma)
-0.14
1.27
1.00
0.01
2.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
ldl cholesterol
,
obesity with early age of onset (age >2)
,
paternal transmission distortion
,
serum creatinine
,
transmission distortion
GTEx eQTL
Artery_Aorta
,
Brain_Cerebellar_Hemisphere
,
Cells_Cultured_fibroblasts
,
Colon_Transverse
,
Esophagus_Mucosa
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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