ADASTRA v1.6.10
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rs226058
chr16:21301362
A
>
G
Sequence
ggggccctttcagggacttggggc[A/G]tagggtagggcgcatgggacgagg
ASB in cell types
K562 (myelogenous leukemia)
HepG2 (hepatoblastoma)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
-0.12
0.94
1.00
3.4·10
-32
2.00
HepG2 (hepatoblastoma)
1.51
-0.75
3.3·10
-7
0.90
2.88
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5
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Motif analysis
No data available
Genetic associations
GRASP
ldl cholesterol
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Lung
,
Muscle_Skeletal
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale