rs2269939 chr12:119804458 C>T
- Sequence
ctggctggaaccccacctggctgc[C/T]gcctgcctgccaggggccagtgct
- ASB in cell types
- pancreas heart left ventricle
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.82 | 0.46 | 1.40 | -3.75 | Concordant |
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Motif analysis
