rs2272262 chr7:55366187 G>C
- Sequence
gacaggctgtgttcgtcccccggc[G/C]accacggatgagcccggcctccct
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ZN407_HUMAN GMEB1_HUMAN KDM1A_HUMAN EGR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN407_HUMAN | n/a | 0.51 | 2.00 | n/a | n/a | |||
| GMEB1_HUMAN | n/a | 2.47 | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | -0.83 | 1.85 | 2.00 | n/a | n/a | |||
| EGR1_HUMAN | -0.96 | 1.50 | 2.00 | n/a | No Hit |
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