rs2272648 chr8:133250289 T>C
- Sequence
agcttacaggccaggtgtccttcc[T/C]ggggacacctgtcctattaatcta
- ASB in cell types
- VCaP (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| VCaP (prostate carcinoma) | 0.32 | 0.47 | 1.62 |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), mitral annular calcium, primary rhegmatogenous retinal detachment, prop taste detection threshold, schizophrenia