rs2275079 chr1:155934386 T>C
- Sequence
ccccgcggacatggcgaccgcttc[T/C]actcaaccacccgccaactatccg
- ASB in cell types
- HEK293 (embryonic kidney) CD14+ monocytes adrenal gland
- ASB for transcription factors
- CTCF_HUMAN STAT1_HUMAN ZFX_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.52 | 0.86 | 1.35 | n/a | No Hit | |||
| STAT1_HUMAN | n/a | 2.77 | 2.50 | 1.54 | Weak Concordant | |||
| ZFX_HUMAN | -0.63 | 0.77 | 1.00 | n/a | No Hit |
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Motif analysis
