rs2276128 chr11:118102879 G>T
- Sequence
acacacgtgacctctcttgactcc[G/T]cagacatcttgtgggggtggggcc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NCOR1_HUMAN EGR1_HUMAN COT1_HUMAN ARI1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NCOR1_HUMAN | -1.38 | 2.59 | 2.00 | n/a | n/a | |||
| EGR1_HUMAN | 0.14 | 2.58 | 2.00 | n/a | No Hit | |||
| COT1_HUMAN | n/a | 2.85 | 2.00 | n/a | No Hit | |||
| ARI1B_HUMAN | n/a | 0.83 | 2.00 | n/a | n/a | |||
| REQU_HUMAN | -1.14 | 2.11 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Cortex, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Nerve_Tibial, Pituitary, Small_Intestine_Terminal_Ileum, Thyroid