rs2276759 chr3:150603228 G>A
- Sequence
tccaggagtgtgcgcgggcgccgg[G/A]ccgcgcaggcgcattactgctccc
- ASB in cell types
- A549 (lung carcinoma) MCF7 (Invasive ductal breast carcinoma) mammary epithelial cells H1 (embryonic stem cells)
- ASB for transcription factors
- CTCF_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.17 | 0.58 | 1.30 | n/a | No Hit | |||
| JUN_HUMAN | 1.10 | -0.30 | 2.14 | n/a | No Hit |
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