rs2278702 chr15:80402580 A>T
- Sequence
ctatttatgggctatttatgggcc[A/T]ccagagattgaactgcctgtgggg
- ASB in cell types
- HEK293 (embryonic kidney)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HEK293 (embryonic kidney) | -0.35 | 0.77 | 1.81 |
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Motif analysis
No data available
Genetic associations
GRASP biploar disorder (bipolar i disorder), bipolar disorder, bipolar disorder and major depressive disorder, infant head circumference, major depressive disorder, waist hip ratio
GTEx eQTL Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Amygdala, Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Brain_Substantia_nigra, Colon_Sigmoid, Colon_Transverse, Esophagus_Muscularis, Lung, Nerve_Tibial, Pancreas, Pituitary, Testis, Thyroid