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rs2278987 chr15:72117428 T>C

Sequence
ggggtactaatggggtctgctggg[T/C]tggggggaccgtgacagaatctcc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
KDM1A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM1A_HUMAN -1.33 1.48 1.000.04 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP height parkinsons disease
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Brain_Cerebellar_Hemisphere Breast_Mammary_Tissue Cells_Cultured_fibroblasts Esophagus_Mucosa Esophagus_Muscularis Lung Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Stomach Thyroid

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