rs2279686 chr15:34362517 C>T
- Sequence
gaaaacctcgccccctccacgccc[C/T]tgtggttcctttgccctgtgcaac
- ASB in cell types
- LHSAR (prostate epithelial cells)
- ASB for transcription factors
- ANDR_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.31 | 1.40 | 1.50 | n/a | No Hit | |||
| CTCF_HUMAN | -0.72 | 1.23 | 1.00 | 2.08 | Concordant |
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Motif analysis
