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rs228060 chr21:42537439 A>G

Sequence
ggtataaaaagacccaaagtggga[A/G]tgtgtttttctcagttactggaaa
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.70 0.25 0.031.00 1.46 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP homa-b
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Coronary Artery_Tibial Brain_Anterior_cingulate_cortex_BA24 Brain_Cerebellar_Hemisphere Brain_Cortex Breast_Mammary_Tissue Cells_Cultured_fibroblasts Esophagus_Mucosa Esophagus_Muscularis Heart_Left_Ventricle Liver Lung Muscle_Skeletal Nerve_Tibial Ovary Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Stomach Testis Thyroid

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