ADASTRA v1.6.10
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rs228274
chr17:38752808
A
>
G
Sequence
tggaattgctctggcgatcgaggg[A/G]tcctagtacaccgcaatcatggtg
ASB in cell types
HepG2 (hepatoblastoma)
HEK293 (embryonic kidney)
breast tumor tissue
monocyte-derived dendritic cells
ASB for transcription factors
ESR1_HUMAN
ZBT17_HUMAN
ZN366_HUMAN
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN
n/a
2.47
1.00
3.8·10
-3
2.50
n/a
No Hit
ZBT17_HUMAN
2.13
n/a
0.02
1.00
2.00
n/a
No Hit
ZN366_HUMAN
1.70
-1.95
0.03
1.00
1.33
n/a
n/a
Items per page:
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Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
,
height
,
triglycerides change with statins
,
variant creutzfeldt-jakob disease
GTEx eQTL
Artery_Tibial
,
Esophagus_Mucosa
,
Heart_Atrial_Appendage
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)