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rs2287302 chr17:68436214 C>G

Sequence
agctggcttatggtgaggttgact[C/G]acagcaagcccgaggggaaatagt
ASB in cell types
foreskin keratinocyte K562 (myelogenous leukemia) GM12878 (female B-cells)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.60 0.37 1.0·10-60.60 1.75 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol
GTEx eQTL Adipose_Subcutaneous Artery_Aorta Artery_Tibial Esophagus_Mucosa Heart_Left_Ventricle Ovary

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