rs228835 chr20:51447709 C>T
- Sequence
tcaggaacagcctggacttcccag[C/T]gtgaactttgcctgaagggttaca
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| MCF7 (Invasive ductal breast carcinoma) | -0.54 | 1.16 | 4.12 |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, bipolar disorder, college completion, ldl cholesterol, salmonella-induced pyroptosis, total cholesterol, waist hip ratio, years of education