ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs228882
chr17:66448030
G
>
T
Sequence
ctgccttatttgccttggtatcta[G/T]gagcactcaaaagtgaatagattg
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma)
-0.12
0.64
1.00
9.2·10
-3
1.68
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
ldl cholesterol
,
prop taste detection threshold
,
total cholesterol
,
triglycerides
GTEx eQTL
Colon_Sigmoid
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale