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rs2289411 chr15:73983447 T>C

Sequence
gggcctggactgcagccaggaagg[T/C]gggccagccaggatccccaggtaa
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
GLIS1_HUMAN ZN335_HUMAN ZBT20_HUMAN ZIC2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GLIS1_HUMAN -3.49 3.00 1.009.8·10-8 1.33 n/a n/a
ZN335_HUMAN n/a 2.91 1.006.7·10-7 1.33 n/a No Hit
ZBT20_HUMAN -2.85 2.65 1.003.4·10-6 1.33 n/a n/a
ZIC2_HUMAN -2.64 2.43 1.008.1·10-5 1.50 n/a n/a
ZN600_HUMAN -2.09 1.89 1.002.1·10-4 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Whole_Blood

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