rs2291866 chr4:128553159 C>T
- Sequence
ggcctcctgcccctgtgtgtactc[C/T]taggtttaatgaaaattggtgcct
- ASB in cell types
- breast epithelial cells gastrocnemius medialis A549 (lung carcinoma) breast tumor tissue
- ASB for transcription factors
- CTCF_HUMAN FOXA1_HUMAN JUN_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.33 | 1.29 | 1.30 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.37 | 1.09 | 1.61 | 2.68 | Concordant | |||
| JUN_HUMAN | 0.97 | -0.00 | 1.06 | n/a | No Hit |
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Motif analysis
