rs2294254 chr1:177209572 T>C
- Sequence
aggagtgacatttgtgaatgagtg[T/C]gatgaattgtttctgtttgtttag
- ASB in cell types
- A549 (lung carcinoma) coronary artery smooth muscle
- ASB for transcription factors
- GCR_HUMAN EP300_HUMAN JUN_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.64 | -1.49 | 1.97 | n/a | No Hit | |||
| EP300_HUMAN | 1.16 | 0.09 | 1.61 | n/a | n/a | |||
| JUN_HUMAN | 1.20 | -0.56 | 1.87 | n/a | No Hit | |||
| ESR1_HUMAN | 1.90 | -3.82 | 2.50 | n/a | No Hit |
Items per page:
1 – 4 of 4