ADASTRA v1.6.10
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rs2294943
chr1:19251533
C
>
T
Sequence
tgatgcgagcgcatgcaccaccca[C/T]cgccgtcccggcatgcaccgcgcc
ASB in cell types
germinal center B-cells
CD14+ monocytes
ASB for transcription factors
KMT2B_HUMAN
STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KMT2B_HUMAN
2.60
0.08
4.6·10
-5
1.00
1.78
n/a
n/a
STAT1_HUMAN
1.54
n/a
3.8·10
-4
1.00
2.50
n/a
No Hit
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5
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Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
hdl cholesterol
,
mitral annular calcium
,
total cholesterol
GTEx eQTL
Muscle_Skeletal
,
Nerve_Tibial
,
Pancreas
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)