rs2297877 chr9:35604131 C>G
- Sequence
cgggatcgcgtgtcaccacccaac[C/G]ctagcgatgattggctatttcgcc
- ASB in cell types
- GM12878 (female B-cells) foreskin keratinocyte DND41 (acute lymphoblastic leukemia) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- STAT1_HUMAN E4F1_HUMAN FOXK2_HUMAN EP300_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | -3.37 | 1.90 | 2.50 | n/a | No Hit | |||
| E4F1_HUMAN | 2.04 | -1.95 | 1.33 | n/a | n/a | |||
| FOXK2_HUMAN | 1.72 | -2.71 | 1.92 | n/a | n/a | |||
| EP300_HUMAN | 1.95 | 0.27 | 1.33 | n/a | n/a |
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