rs2300706 chr3:186241956 T>A
- Sequence
gcccaggctgaggctgggacttag[T/A]gggttccgggtctccagcctttgc
- ASB in cell types
- foreskin keratinocyte GM12878 (female B-cells) prostate gland
- ASB for transcription factors
- CTCF_HUMAN ELF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.40 | 0.98 | 1.33 | n/a | No Hit | |||
| ELF1_HUMAN | 1.65 | -1.90 | 1.33 | -0.53 | Weak Concordant |
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Motif analysis
