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rs2300743 chr1:39776673 A>C

Sequence
aggaaagaacgtgccttgtcccac[A/C]gcacccaagggtgtcttttgaagt
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF1_HUMAN BHE40_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -0.99 1.44 1.000.01 1.33 n/a No Hit
BHE40_HUMAN -1.75 1.81 1.000.01 1.33 n/a No Hit
IKZF2_HUMAN -0.59 1.54 1.000.03 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP type 2 diabetes

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