rs2302616 chr2:10448065 C>A
- Sequence
gcccggggcccggggcccgcagcc[C/A]gccccggctcccgccctcgctccc
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells) HEK293 (embryonic kidney)
- ASB for transcription factors
- VEZF1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| VEZF1_HUMAN | 2.36 | -3.62 | 2.00 | -2.34 | Concordant | |||
| CTCF_HUMAN | 0.70 | 0.56 | 1.30 | n/a | No Hit |
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Motif analysis
