rs2303109 chr19:6739699 G>T
- Sequence
cggctgagtctccccggggagggc[G/T]gcgggcggcgggcggcggggaccg
- ASB in cell types
- HCT-116 (colon carcinoma)
- ASB for transcription factors
- SP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP1_HUMAN | 0.06 | 0.84 | 1.00 | 1.28 | Weak Concordant |
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Motif analysis
