rs2303922 chr7:151028635 A>C
- Sequence
gtaaaaacggaaaaacctactcag[A/C]gcgggccattgaccgcccggcagg
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) A549 (lung carcinoma) PC9 (lung adenocarcinoma)
- ASB for transcription factors
- JUN_HUMAN AFF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | -0.19 | 0.93 | 2.00 | n/a | No Hit | |||
| AFF1_HUMAN | 0.91 | -1.86 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Brain_Cortex, Breast_Mammary_Tissue, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Stomach, Testis, Thyroid, Whole_Blood