rs2306978 chr10:132223228 G>A
- Sequence
tcagtgctgctacctaaacccctg[G/A]cgccagaggacagcagagggatct
- ASB in cell types
- PANC1 (pancreatic ductal adenocarcinoma) lymphoblastoid cells gastroesophageal sphincter stomach
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.10 | 1.05 | 1.45 | 0.69 | Weak Concordant |
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Motif analysis
