ADASTRA v1.6.10
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adastra.autosome.org
rs2310871
chr2:241111576
C
>
A
Sequence
tccactcaggccctacaaatgaac[C/A]acaatcttcctttccgttttgctt
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
PKNX1_HUMAN
IKZF1_HUMAN
ZN687_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN
2.37
-2.44
1.8·10
-5
1.00
1.00
n/a
No Hit
IKZF1_HUMAN
1.62
-1.33
3.2·10
-3
1.00
1.33
n/a
No Hit
ZN687_HUMAN
1.83
n/a
0.03
1.00
1.33
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Visceral_Omentum
,
Artery_Aorta
,
Artery_Tibial
,
Brain_Spinal_cord_cervical_c-1
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Pancreas
,
Small_Intestine_Terminal_Ileum
,
Spleen
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)