rs2310873 chr2:241111455 C>T
- Sequence
gtaggtgttagtggaaaacacctg[C/T]tatctatttctgacttaataaagt
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- MEF2B_HUMAN ELF1_HUMAN ZN687_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | 2.15 | n/a | 1.33 | 0.85 | Weak Discordant | |||
| ELF1_HUMAN | 2.17 | -2.21 | 1.33 | n/a | No Hit | |||
| ZN687_HUMAN | 2.07 | -1.76 | 1.33 | n/a | n/a | |||
| IKZF1_HUMAN | 1.30 | -0.53 | 1.33 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Spinal_cord_cervical_c-1, Esophagus_Mucosa, Esophagus_Muscularis, Pancreas, Small_Intestine_Terminal_Ileum, Spleen, Thyroid, Whole_Blood