rs2321482 chr13:33745478 T>C
- Sequence
ggttcttgcttccaggagaatact[T/C]gaaatagatcttttcatgaacaag
- ASB in cell types
- LNCaP (prostate carcinoma) VCaP (prostate carcinoma) pancreas
- ASB for transcription factors
- ANDR_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 0.99 | 0.12 | 2.02 | n/a | No Hit | |||
| CTCF_HUMAN | 0.99 | 0.18 | 1.83 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, bipolar disorder, body mass index (bmi), body mass index (bmi) (within family tests max measurement), body mass index (bmi) (within family tests), homa-ir, ldl cholesterol change with statins, prop taste detection threshold