rs232494 chr21:21361396 G>T
- Sequence
ttcactttatgaaacctaatggtt[G/T]acctagttaaacaacctcttctgt
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -1.73 | 1.73 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), college completion, cystatin c in serum, obesity with early age of onset (age >2), years of education