rs232606 chr2:38148629 C>T
- Sequence
gaccttagctttcaaataggacct[C/T]gatcattgctcaatgaccaagtca
- ASB in cell types
- A549 (lung carcinoma) SK-BR-3 (breast adenocarcinoma) K562 (myelogenous leukemia) fetal bone marrow-derived mononuclear cells
- ASB for transcription factors
- ERR1_HUMAN KMT2A_HUMAN GCR_HUMAN EP300_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ERR1_HUMAN | -1.93 | 1.99 | 1.50 | n/a | No Hit | |||
| KMT2A_HUMAN | 1.91 | -1.30 | 1.25 | n/a | n/a | |||
| GCR_HUMAN | 0.09 | 1.10 | 1.43 | n/a | No Hit | |||
| EP300_HUMAN | -0.42 | 0.95 | 1.55 | n/a | n/a | |||
| HES2_HUMAN | -2.09 | 1.76 | 1.50 | n/a | n/a |
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