ADASTRA v1.6.10
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rs234117
chr1:184982544
C
>
T
Sequence
tcactctttgagaacagaactttt[C/T]cggctaaatttatttaagggggct
ASB in cell types
K562 (myelogenous leukemia)
LNCaP (prostate carcinoma)
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
-0.68
0.72
1.00
1.3·10
-4
2.84
LNCaP (prostate carcinoma)
-0.94
1.13
1.00
4.3·10
-3
1.33
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5
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Motif analysis
No data available
Genetic associations
GRASP
diabetic retinopathy in type 2 diabetes mellitus
,
fasting insulin
,
homa-b
,
homa-ir
GTEx eQTL
Adipose_Subcutaneous
,
Cells_Cultured_fibroblasts
,
Lung
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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