ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs235029
chr20:49630591
A
>
G
Sequence
taacacttattttccagcaagcac[A/G]tattcacgttacttttagaataga
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF1_HUMAN
RELB_HUMAN
NBN_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN
-1.43
1.31
1.00
7.7·10
-4
1.42
n/a
No Hit
RELB_HUMAN
-2.22
2.04
1.00
4.1·10
-3
1.33
n/a
No Hit
NBN_HUMAN
-2.19
2.01
1.00
0.04
1.33
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
fasting insulin
,
homa-b
,
homa-ir
,
parkinsons disease
,
total cholesterol
GTEx eQTL
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Cells_Cultured_fibroblasts
,
Cells_EBV-transformed_lymphocytes
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)