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rs235029 chr20:49630591 A>G

Sequence
taacacttattttccagcaagcac[A/G]tattcacgttacttttagaataga
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF1_HUMAN RELB_HUMAN NBN_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -1.43 1.31 1.007.7·10-4 1.42 n/a No Hit
RELB_HUMAN -2.22 2.04 1.004.1·10-3 1.33 n/a No Hit
NBN_HUMAN -2.19 2.01 1.000.04 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP fasting insulin homa-b homa-ir parkinsons disease total cholesterol
GTEx eQTL Brain_Cerebellar_Hemisphere Brain_Cerebellum Cells_Cultured_fibroblasts Cells_EBV-transformed_lymphocytes

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