rs2351958 chr11:16226474 C>A
- Sequence
ccttcacactaaggaggaaatgcc[C/A]gacacagcacagaggagcatgtgt
- ASB in cell types
- LNCaP (prostate carcinoma) VCaP (prostate carcinoma) A549 (lung carcinoma) prostate tumor
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN GCR_HUMAN ERG_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.57 | 1.70 | 1.67 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.11 | 2.14 | 1.72 | n/a | No Hit | |||
| GCR_HUMAN | 0.55 | 1.95 | 2.00 | n/a | No Hit | |||
| ERG_HUMAN | -1.25 | 1.72 | 2.17 | n/a | No Hit | |||
| HXB13_HUMAN | -1.90 | 1.46 | 1.83 | n/a | No Hit |
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