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rs235298 chr21:44875672 G>C

Sequence
gccgggtaccattggaacaccaag[G/C]taatttacttgtttgctcaattgg
ASB in cell types
foreskin keratinocyte GM12878 (female B-cells)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte -3.25 2.05 1.001.3·10-4 2.50
GM12878 (female B-cells) 0.46 0.28 0.020.63 1.28
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol lp-pla2 activity
GTEx eQTL Artery_Tibial Esophagus_Muscularis Liver Lung Muscle_Skeletal Ovary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Stomach Testis Thyroid Whole_Blood

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