rs2357292 chr10:17662634 A>T
- Sequence
gagatcatgtactctagagggaga[A/T]tgcctgggttcaaatcttggctct
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HDAC1_HUMAN | 1.69 | -0.51 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Cerebellum, Brain_Spinal_cord_cervical_c-1, Colon_Sigmoid, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Spleen, Thyroid, Whole_Blood