rs235753 chr20:6788886 G>A
- Sequence
gatatttttgtgccattgcacaat[G/A]ccaagaacattctcaggagtctag
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- CEBPB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | n/a | 1.51 | 1.33 | 3.27 | Concordant |
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Motif analysis
Genetic associations
GRASP abnormal involuntary movement scale, body mass index (bmi), hypertension (early onset hypertension)