rs236129 chr20:5906793 T>G
- Sequence
atggacttctgtaaacgtccattt[T/G]caggtcagcagtttccagagtggt
- ASB in cell types
- VCaP (prostate carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN HXB13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.12 | 1.52 | 1.40 | n/a | No Hit | |||
| HXB13_HUMAN | -0.33 | 2.03 | 1.33 | n/a | No Hit |
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