rs236444 chr6:36755927 A>G
- Sequence
gggcaacaacctgtgaaaagcacc[A/G]acgtggggaatttcccagggtagg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) periferal blood macrophages CD14+ monocytes
- ASB for transcription factors
- ESR1_HUMAN GATA3_HUMAN SPI1_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.40 | 2.26 | 1.48 | n/a | No Hit | |||
| GATA3_HUMAN | -0.12 | 2.49 | 1.42 | n/a | No Hit | |||
| SPI1_HUMAN | 0.21 | 1.66 | 1.94 | n/a | No Hit | |||
| STAT1_HUMAN | 0.49 | 2.35 | 2.21 | n/a | No Hit | |||
| FOXK2_HUMAN | -1.45 | 1.78 | 1.33 | n/a | n/a |
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