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rs2366775 chr5:90644219 G>C

Sequence
tttgataccatttaagcatatgca[G/C]tgcaactcaaacactcaagaatga
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ENL_HUMAN SPT5H_HUMAN AFF1_HUMAN COT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ENL_HUMAN n/a 3.10 1.003.0·10-7 2.00 n/a n/a
SPT5H_HUMAN n/a 2.86 1.005.1·10-5 2.00 n/a n/a
AFF1_HUMAN -3.49 2.57 1.001.8·10-4 2.00 n/a n/a
COT1_HUMAN -2.39 2.47 1.001.0·10-3 2.00 n/a No Hit
SMCE1_HUMAN n/a 2.49 1.000.02 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP total cholesterol change with statins triglycerides change with statins
GTEx eQTL Artery_Tibial Colon_Transverse Heart_Atrial_Appendage Heart_Left_Ventricle Lung Muscle_Skeletal Pancreas Stomach Testis Whole_Blood

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