rs2373927 chr7:151027324 A>C
- Sequence
caagtacccagacacaaaacactg[A/C]ggaaggctgcagggacctctgcct
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- LMBL2_HUMAN ZN592_HUMAN REQU_HUMAN SMCA4_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| LMBL2_HUMAN | 3.06 | n/a | 1.50 | n/a | n/a | |||
| ZN592_HUMAN | 2.51 | n/a | 1.50 | n/a | n/a | |||
| REQU_HUMAN | 1.56 | n/a | 1.50 | n/a | n/a | |||
| SMCA4_HUMAN | 2.03 | -1.94 | 1.50 | n/a | n/a | |||
| MGAP_HUMAN | 2.23 | n/a | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Brain_Cerebellar_Hemisphere, Breast_Mammary_Tissue, Colon_Transverse, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Testis, Thyroid, Whole_Blood