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rs237554 chr19:6686648 T>C

Sequence
atctcagcttggcttagggtcatc[T/C]gtcccagctcagctaaaagccatg
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN 1.57 -0.75 5.3·10-31.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP asthma longstanding arthritis neuroblastoma (brain cancer) schizophrenia
GTEx eQTL Nerve_Tibial

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