ADASTRA v1.6.10
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rs237831
chr16:68023193
T
>
C
Sequence
gggaaaagagccgcaccggccgcg[T/C]tagagccatgtttcccttagtgcg
ASB in cell types
MDA-MB-453 (breast adenocarcinoma)
MCF7 (Invasive ductal breast carcinoma)
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MDA-MB-453 (breast adenocarcinoma)
1.46
0.45
2.6·10
-3
1.00
1.50
MCF7 (Invasive ductal breast carcinoma)
0.73
0.10
8.7·10
-3
1.00
1.84
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
aortic valve calcium
,
homa-b
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Aorta
,
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Cells_EBV-transformed_lymphocytes
,
Colon_Sigmoid
,
Esophagus_Mucosa
,
Heart_Left_Ventricle
,
Muscle_Skeletal
,
Nerve_Tibial
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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