rs2379178 chr2:235045518 A>G
- Sequence
gcccgagtccttccgctacccaga[A/G]aggaggaagtgaaacttgcccttg
- ASB in cell types
- SK-BR-3 (breast adenocarcinoma) GM12878 (female B-cells)
- ASB for transcription factors
- ERR1_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ERR1_HUMAN | -0.58 | 1.63 | 1.50 | n/a | No Hit | |||
| SPI1_HUMAN | 2.23 | -0.58 | 1.92 | -2.80 | Concordant |
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Motif analysis
