rs2382642 chr17:74354138 T>G
- Sequence
agaggtggccttgatctcgggttg[T/G]atgttccccgtgtcccgctgcaga
- ASB in cell types
- K562 (myelogenous leukemia) foreskin keratinocyte HCT-116 (colon carcinoma) A549 (lung carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.11 | 0.33 | 1.64 | n/a | No Hit |
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