rs238767 chr19:6517111 G>A
- Sequence
ggagaaaaggggcccagagtgatt[G/A]ttcctcaggggagggagggggagg
- ASB in cell types
- HEK293 (embryonic kidney) esophagus squamous epithelium
- ASB for transcription factors
- ZBT26_HUMAN ZSCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT26_HUMAN | 2.38 | n/a | 2.00 | n/a | n/a | |||
| ZSCA4_HUMAN | 1.78 | n/a | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, total cholesterol