rs2412980 chr22:30196080 T>C
- Sequence
aaatattgttcactcgcatggcat[T/C]ggcttactaagccactacagagcc
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- WT1_HUMAN KLF8_HUMAN ZXDB_HUMAN ZBT8A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| WT1_HUMAN | n/a | 3.01 | 2.00 | n/a | No Hit | |||
| KLF8_HUMAN | n/a | 2.61 | 2.00 | n/a | No Hit | |||
| ZXDB_HUMAN | n/a | 2.24 | 2.00 | n/a | n/a | |||
| ZBT8A_HUMAN | -2.02 | 2.08 | 2.00 | n/a | n/a |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, all-cause death (mortality) on dialysis in patients with type 2 diabetes, waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Breast_Mammary_Tissue, Colon_Sigmoid, Colon_Transverse, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid