rs2423556 chr20:11512007 C>T
- Sequence
aggaggcagggccctggccactgg[C/T]acataaatgactctccatgtgact
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- MTA2_HUMAN BHE40_HUMAN IKZF2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTA2_HUMAN | -2.51 | 2.33 | 1.33 | n/a | n/a | |||
| BHE40_HUMAN | -1.34 | 1.51 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | -0.69 | 1.55 | 1.33 | n/a | n/a |
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